sort order for LabTestResultDataType objects; genomics_sample_linkage_form_data doesn't need left join for request_lab_test_results as family_id is required field in dependent query; fix for results.t after putting html_line_break on result summaries; for clarity changed wording of 'amended report issued by' on report

kill process status radio box not checkbox - only kill 1 at a time; redirect after killing process status (inconsistent, sometimes fatal); adapted kidreaper.pl for cron with multiple service names

* used Capture::Tiny in Local::DevelCycle - works OK with fastcgi process dumping fastcgi captured cycles to logfile, test harness & dev box fatal * user_agent string captured using HTTP::BrowserDetect

adapted genomic_xml for single file per request

added storage module logging; new storage.t; adapted vialId validation to recognise 10-digit ids in addition to leading 2 alphabetical chars; bugfix to storage edit function - requied to capture vialId as well as request_id for validation failure return to edit(); added new fields to DNA extraction worksheet

linked dashboard lab-test status charts to worklists

bugfix - failure to update request_result_summary timestamp col on result_summary update causing premature locking of records; action logged in request history when request status set to complete by incomplete_requests.pl or M::R::RequestUpdate::update_request_status; adapted incomplete_requests.pl to include status complete requests with diagnosis awaiting final diagnosis/review; ScriptHelpers::do_request_history renamed to log_diagnosis_alert to avoid conflict with M::R::HistoryAction method of same name; nav bar loads HMRN link if user has either view_outreach_data or edit_outreach_data permissions; L::Role::DiagnosisConfirm::diagnosis_confirmation_required hash of lab_sections renamed from %map to %required for clarity

bugfix to admin new user tt for comparison of last_name to username if apostrophe present

fixed inflate_mysql_date_to_datetime() to protect against invalid dates from pre-HILIS4 data; changed prognostic_indicator test script to manipulate dob instead of diagnosis date to provide better control of age; highlight invalid age in HMRN event data table

adapted xNA extraction worksheets to split xFU into xF & xU samples and adjust for number of blocks for xF, xU & xBL samples; xNA extration worksheets append empty rows to max 12; patched view_cron_log() regex to include hyphenated script names; DB::RequestExternalRef status field required larger varchar value

added process size logging facility to fastcgi process; authorised/incomplete records worklist displays outstanding lab tests; added cd SCRIPT_DIR to fcgi script so git version info loaded when restarted from outside HILIS4 dir

bugfixes: LL::Search doesn't have access to is_lab_staff() method of LIMS::Base so had to create own version; {QUERY_STRING} not passed in 'post' method in request form upload, so substituted CGI, needed 'tkn' param addition to FileUploader default.tt

adapted request forms upload function to provide encrypted 'centre' token so FileUploader puts request forms in correct location (leeds/uclh)

changed update patient method to prevent modification of patient with an NHS number if single_record_only mode selected (nhs number is unique col and can't be shared with another patient profile); new register_edit.t tests

applied same server-side validation to storage vialId as already done by ajax, factored out common regex to LLU; moved M::Ajax::check_storage_vialId() to M::Validation::has_storage_vialId(); applied check that patient entry exists to C::Patient::_check_nhs_number_usage() for PID change, but not implemented as creation of new patient works OK; alphabetically sorted lims_messages.pl dfv section