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bin
escaped spaces in tt a name var; changed production env flag to deployment
12 years ago
environments
bugfix to _prediction_and_score() - needed to skip undef vars; colour-coded results if deleterious or damaging; truncated long (>30 char) variation results; re-ordered results cols for clarity
12 years ago
lib
added transcription db = refseq option; fix for FLT3-ITD 1 variant; tests for invalid variant format
12 years ago
public
added bootswatch spacelab css; added bootstrap table styles
12 years ago
script
added 2 cols to VEP table (position in CDS and position in protein; added 12 new exons in ref table
12 years ago
t
added transcription db = refseq option; fix for FLT3-ITD 1 variant; tests for invalid variant format
12 years ago
views
added transcription db = refseq option; fix for FLT3-ITD 1 variant; tests for invalid variant format
12 years ago
config.yml
913B
initial working project
13 years ago
ngs.sqlite
16kB
renamed vep orphans to non-CDS regions; added new ref entry to sqlite db; results page displays input src filename
12 years ago