use Test::More import => ['!pass']; use NGS with => { logger => 'console', log => 'error' }; # spare console from overload use FindBin qw($Bin); # warn $Bin; use Dancer2::Test apps => ['NGS']; use Data::Dumper; use Modern::Perl; require 't/test-lib.pl'; # sample match failure (VEP orphan): # test data ==================================================================== my @test_data = ( [ 'RUNX exon 4.1', '89:A/T', 'Accepted', 43.50, 177, 43.50, 177, ], ); # ============================================================================== my $args = construct_request(\@test_data); my $response = dancer_response( POST => '/vep', $args ); # print_output($response); response_status_is $response => 200; # RUNX exon 4.1 [89] - VEP orphan response_content_like $response => qr(RUNX exon 4.1 \[89:A/T\]); response_content_like $response => qr(Processed 1 vep input rows); response_content_like $response => qr(Sample results for data src "data.txt" \[0\]); response_content_like $response => qr(Sample match failures \[1\]); response_content_like $response => qr(VEP results \[0\]); response_content_like $response => qr(Non-CDS VEP results \[1\]); response_content_unlike $response => qr(_variant); # none done_testing;