P3X GitList

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July 9, 2014

Browse Changes

sorted vcf data by chromosome and start position before writing vep input - same as for 454 data

52da4abec603afa8c3f1737092025a7d406c5e85 52da4ab

RAJ authored on 09/07/2014 13:27:31

July 8, 2014

Browse Changes

added new counters for vep input rows and raw src_file rows; patched lab number regex to allow optional letter prefix; fixed test scripts to report vep input row count instead of 'accepted' rows

f4b279b9b4d66390b18a4060d16915c4274c0978 f4b279b

RAJ authored on 08/07/2014 19:41:56

December 6, 2013

Browse Changes

updated README's

988cd9f0c67390a22fc9ee79b47f3fca08c74463 988cd9f

raj authored on 06/12/2013 16:08:08

August 12, 2013

Browse Changes

patched VEP::_get_hmds_refs to return error if col header doesn't look like lab number; 015_data.t to test

3e9e2be86757392f11cd444a7d454c40e45458e1 3e9e2be

raj authored on 12/08/2013 10:15:18

August 8, 2013

Browse Changes

fixed refseq selection function - required separate cache dir & use of --dir option

060f9b46756865d4fd73289a1830dfd4e47121eb 060f9b4

raj authored on 08/08/2013 13:31:19