docs/ lib/NGS/Session/ logs/ public/css/bootstrap/amelia/ public/css/bootstrap/cerulean/ public/css/bootstrap/cleancanvas/ public/css/bootstrap/simplex/ public/css/bootstrap/README public/images/Thumbs.db script/example.vcf script/vcf/analysis script/vcf/src script/variant_effect_predictor* t/*.htm t/data/2130-12.vcf t/data/28643-15_S1.vcf t/data/874-12.zip t/data/data.txt t/data/dnmt3a.txt t/data/myeloid_variants.txt t/data/myeloid_variants.vep t/data/test_data.txt t/example.vep MANIFEST MANIFEST.SKIP Makefile.PL debug.txt git.diff output* ref.csv ref_seq.csv stdout_summary.html variant_effect_output.txt variant_effect_output.txt_summary.html variant_effect_predictor.tar.gz