use Test::More import => ['!pass'];
use NGS with => { logger => 'console', log => 'error' }; # spare console from overload
use FindBin qw($Bin); # warn $Bin;
use Dancer2::Test apps => ['NGS'];
use Data::Dumper;
use Modern::Perl;
require 't/test-lib.pl';
# lab number misformat
# test data ====================================================================
my @test_data = (
[
'ASXL exon 12.7',
'120:C/T',
'Accepted',
100, 8,
4.94, 81,
100, 8,
],
);
# ==============================================================================
my $args = construct_request(\@test_data); # warn Dumper $args->{files}->[0]->{data};
# remove '/' from 1st lab number:
$args->{files}->[0]->{data} =~ s/1\/10/110/g; # warn Dumper $args->{files}->[0]->{data};
my $response = dancer_response( POST => '/vep', $args ); # print_output($response);
response_status_is $response => 200; # exit;
response_content_like $response => qr(ASXL exon 12.7 \[120:C/T\]);
response_content_like $response => qr(Processed 1 accepted rows);
response_content_like $response => qr(Sample results for data src "data.txt" \[1\]);
response_content_like $response => qr(cannot find lab number in field H110);
response_content_like $response => qr(Sample match failures \[0\]);
response_content_like $response => qr(VEP results \[2\]);
response_content_like $response => qr(Non-CDS VEP results \[0\]);
done_testing;