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..
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diagrams
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hilis3 conversion scripts for YHHN
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15 years ago
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xsd
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NCRS COSD script * use XML::LibXML & XML::Compile::Schema from xsd to allow ordered elements * alternative function to generate xml using Template - easier layout control * add xml validator * remove some invalid header text * change most nested elements to inline to match supplied (inconsistent) example * use Encoding::FixLatin 'fix_latin' on free-text entries (result summaries, clinical details) to avoid encoding problems (non-ascii characters in NBT reports) * supply -uft8 flag to IO::All to prevent 'wide character' warning * suspend TopographySNOMEDPathology item, they don't want it * replace hard-coded NHSNumberStatusIndicator with value relating to NHS number presence * only 1 of SampleCollectionDate / SampleReceiptDate * skip *EQAS records and single-character last_name's * skip anonymised clinical trials
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7 years ago
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_hilis_new.sql
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5kB
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hilis3 conversion scripts for YHHN
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15 years ago
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clinican queries.txt
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299B
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hilis3 conversion scripts for YHHN
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15 years ago
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dako_refactor.sql
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9kB
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hilis3 conversion scripts for YHHN
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15 years ago
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diagnosis_history.sql
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598B
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hilis3 conversion scripts for YHHN
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15 years ago
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duplicate_nhs_numbers.sql
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422B
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hilis3 conversion scripts for YHHN
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15 years ago
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email_reports.sql
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2kB
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adapted email_contacts table to accept department code and report status values (setup/schema/email_reports.sql); redesigned mail_reports.pl -> email_reports.pl to allow multiple departments per hospital/organisation (not supported by mail_reports), and department and report status info now derived from email_contacts tbl, not hard-coded into script; reverted referrer_department => {updated some tests with year change or change of html tag
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9 years ago
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genomics_cancer_dataset.sql
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15kB
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participant_id comparison uses Local::Utils::matches() to handle numerical or non-numerical values
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9 years ago
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genomics_cancer_v3.sql
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33kB
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Genomics v3 implementation: * change deployment script db from genomics_v3 to genomics * change frequency of genomics_xml.pl script to 15 mins * include transfer log on live system
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8 years ago
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genomics_cancer_v3_test.sql
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1kB
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update crontab.txt with current cron tasks; add new entry to genomics_notifications.pl; add getopts to xml_validate.pl
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8 years ago
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genomics_data_types.sql
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928B
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add yaml-file validation for named result params; dedicated .t for results validation
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8 years ago
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hilis_new.sql
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7kB
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hilis3 conversion scripts for YHHN
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15 years ago
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hospitals.sql
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30kB
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hilis3 conversion scripts for YHHN
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15 years ago
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how_to_get_clinicians_out_of_new_schema.sql
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667B
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outreach additions & bug-fixes; moved generation of outreach practices & GP's to hilis3_convert ReferralSources & Referrers
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15 years ago
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hts_lab_tests.sql
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3kB
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tidy up (new files + .gitignore)
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8 years ago
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icdo_category.sql
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4kB
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Refactor icdo_category table to include only sub-categories - renamed to icdo_sub_category
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7 years ago
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lims-notes.txt
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759B
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hilis3 conversion scripts for YHHN
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15 years ago
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local_mappings.txt
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858B
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hilis3 conversion scripts for YHHN
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15 years ago
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mater_dei.sql
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4kB
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moved position of bcr-abl transition date notice * update Mater Dei unknown locations
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8 years ago
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mlpa.sql
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6kB
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new db anonymisation function; screen categories sorted lc (for new PNH/AA entry); fixed syntax error in mpla deployment script
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9 years ago
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mlpa_lab_tests.sql
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6kB
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tidy up (new files + .gitignore)
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8 years ago
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mlpa_updates.pl
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12kB
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Add transaction code to update script
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7 years ago
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molecular_worksheets.sql
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3kB
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bugfix: pcr worklist - empty list for id param - returns 0 if no requests
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12 years ago
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new_schema_scaffold.sql
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989B
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hilis3 conversion scripts for YHHN
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15 years ago
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nottingham_rha_to_rx1.sql
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891B
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tidy up (new files + .gitignore)
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8 years ago
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outreach_defaults_and_ranges.sql
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355B
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new C::Report::_get_outreach_data(); new M::Outreach & outreach templates; updated core_data
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15 years ago
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outreach_diagnoses.sql
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308B
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modified C::Report to handle Outreach cases; prevented redirect to root url from C::Report for Outreach cases if record locked; more Outreach lab_test & demographics functions
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15 years ago
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parent_organisations.sql
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26kB
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hilis3 conversion scripts for YHHN
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15 years ago
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parent_organisations_updated.sql
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46kB
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moved patient_notes from Outreach reqeusts to all reqeusts; report page loads chart if applicable to request type
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14 years ago
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patient_duplicates.sql
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2kB
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various minor changes accumulated over past 3 weeks
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15 years ago
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practices.txt
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533B
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hilis3 conversion scripts for YHHN
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15 years ago
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report_refactor_2013.sql
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3kB
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bugfixes and formatting tweaks for print_run; copy_to clone needed deflate => 0; ajax date validation required no warnings uninitialized for hr & min fields
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12 years ago
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request_storage_comment.sql
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106B
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added comment field in storage module
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9 years ago
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result_summary_user.sql
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204B
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reports display author & timestamp of result summary and amended comment; new result_summary.user_id field; new disgnostic terms for ngs_myeloid list; removed non-consented patients from genomics SLF worklist; extraction worksheet edits
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9 years ago
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rfc411-hmrn-menu-options.sql
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1kB
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update dashboard to display referral location data
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8 years ago
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rfc422-fish-test-names.sql
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10kB
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modify some FISH section names; attempt to format Results table width according to total test label & result options width
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7 years ago
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shadowcat_refactored_lims.sql
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10kB
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hilis3 conversion scripts for YHHN
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15 years ago
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test_genomics_cancer_v3.sql
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5kB
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2 unimplemented changes a) delete patient with request if no other associated requests - delayed pending review of conseqeunces for Outreach/HMRN, etc b) message 'from' header change to prevent blocking due to non-existant leedsth.nhs.uk domain - pending confirmation of receipt from some sources; added epithelial tumour to histopathology notifications; Comodo secure seal on login page
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9 years ago
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triggers_and_procedures.sql
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2kB
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new MPLA lab-section deployment script; amended trigger definitions; corrected error in genomics xsd file; tested for existence of self_authorisable.yml file or some print_view.t tests fail
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9 years ago
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ukas_accreditation.sql
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915B
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tidy up (new files + .gitignore)
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8 years ago
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