1. HILIS4.git
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  3. data_extraction
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  README.txt 127B * add utility scripts for extracting data from xl/csv files * remove default '0' from 2 request_storage cols for external scripts which omit these cols 8 years ago
  fluidx_read.pl 65kB add fluidx/intellicode comment regarding scan timeout for NO TUBE's; document telnet commands 7 years ago
  nhse-data.pl 12kB NCRS COSD script * use XML::LibXML & XML::Compile::Schema from xsd to allow ordered elements * alternative function to generate xml using Template - easier layout control * add xml validator * remove some invalid header text * change most nested elements to inline to match supplied (inconsistent) example * use Encoding::FixLatin 'fix_latin' on free-text entries (result summaries, clinical details) to avoid encoding problems (non-ascii characters in NBT reports) * supply -uft8 flag to IO::All to prevent 'wide character' warning * suspend TopographySNOMEDPathology item, they don't want it * replace hard-coded NHSNumberStatusIndicator with value relating to NHS number presence * only 1 of SampleCollectionDate / SampleReceiptDate * skip *EQAS records and single-character last_name's * skip anonymised clinical trials 7 years ago
  omics_data.pl 6kB modify data_extraction/omics_data.pl to check for existing results before insert 7 years ago
  part_numbers_update.pl 2kB * add utility scripts for extracting data from xl/csv files * remove default '0' from 2 request_storage cols for external scripts which omit these cols 8 years ago
  requantification.pl 1kB * add utility scripts for extracting data from xl/csv files * remove default '0' from 2 request_storage cols for external scripts which omit these cols 8 years ago
  salford_and_wigan_workload.pl 2kB new script using Local::WriteExcel support for multiple worksheets 7 years ago
  samples_to_check_for_dna.pl 3kB * add utility scripts for extracting data from xl/csv files * remove default '0' from 2 request_storage cols for external scripts which omit these cols 8 years ago
  slide-storage.pl 5kB patch slide-storage.pl to accept db from command-line 8 years ago
  storage_dna_update.pl 5kB * add utility scripts for extracting data from xl/csv files * remove default '0' from 2 request_storage cols for external scripts which omit these cols 8 years ago
  storage_rack_locations.pl 1kB * add utility scripts for extracting data from xl/csv files * remove default '0' from 2 request_storage cols for external scripts which omit these cols 8 years ago
  storage_vial_deletion.pl 6kB * add utility scripts for extracting data from xl/csv files * remove default '0' from 2 request_storage cols for external scripts which omit these cols 8 years ago
  storage_vial_locations.pl 3kB * add utility scripts for extracting data from xl/csv files * remove default '0' from 2 request_storage cols for external scripts which omit these cols 8 years ago
  storage_vial_rack_allocation.pl 4kB * add utility scripts for extracting data from xl/csv files * remove default '0' from 2 request_storage cols for external scripts which omit these cols 8 years ago
  xna-quantification-change.pl 5kB * add utility scripts for extracting data from xl/csv files * remove default '0' from 2 request_storage cols for external scripts which omit these cols 8 years ago
  README.txt
collection of scripts for reading xls/csv source file, extracting data and writing to db tables (eg request_storage & log-file)