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..
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HMRN
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substitute remaining hard-coded 'hmrn' db-name with variable picked up from hmrn_db method * working hmrn_data.t
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8 years ago
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Roles
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RfC562 - remove dot as permitted specimen list separator and make auto-screening Outreach requests use same method of splitting specimen string as registration function
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6 years ago
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Ajax.pm
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7kB
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RfC594 - fix ajax mysql regex error (brackets/parens not balanced)
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6 years ago
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Audit.pm
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25kB
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RfC524 - change PNH screening terms; fix error in ncg_pnh.pl HTS count query - incorrect 'group by' with COUNT(*)
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7 years ago
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Base.pm
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6kB
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completed rfc changes; -e test for yaml file in check_yaml.pl
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8 years ago
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Chart.pm
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9kB
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patched charts & audit functions to handle minimal datasets eg UCLH not using tissue samples, and having empty dataset using date restriction
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11 years ago
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ClinicalTrial.pm
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5kB
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plasma storage labels supply trial number in place of patient name; fixed error generated when supplying empty #labels option; provided '0' for number of labels to allow valid input for skipping label printing for individual requests
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8 years ago
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Coding.pm
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881B
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new db table & admin functions - anatomical_site (for SNOMED coding)
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10 years ago
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Diagnosis.pm
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8kB
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Refactor icdo_category table to include only sub-categories - renamed to icdo_sub_category
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7 years ago
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Email.pm
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4kB
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replaced 'email_from' config var with 'service_email' globally (except within unused functions)
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9 years ago
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ErrorCode.pm
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4kB
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bugfix: update_error_code_assignments() generated error on submission of single error code (assumed error_code_id param was always arrayref)
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12 years ago
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HMRN.pm
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53kB
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HMRN Potential new diagnoses list - MGUS needs to include new icdo3 code for IgM MGUS
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7 years ago
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History.pm
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11kB
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bugfix to M::History::_parse_patient_history_for_changes() - comparing original (NULL) & changed date vals caused uninitialized warning in DateTime module during auto-stringification, now vals are tested for existence (||= 'NULL') before comparison
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10 years ago
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LabSection.pm
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7kB
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pcr worksheet redesign & a couple of tt typos
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9 years ago
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LabTest.pm
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22kB
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RfC453 lab test accreditation - fix query which ignores new lab-tests
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7 years ago
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Local.pm
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24kB
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Add tests; Incorporate rfc-443; Update mlpa_updates.pl
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7 years ago
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Notification.pm
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3kB
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refactored report_notification block for improved clarity; permitted designation now defined in config files; allows user to set notifications inactive
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9 years ago
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Option.pm
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2kB
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hilis3 conversion scripts for YHHN
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15 years ago
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Outreach.pm
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45kB
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revert QueryLog.pm & log_rotate.pl to pre-9171b6a commit - new version broken in many respects; comment out warn command
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7 years ago
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Patient.pm
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29kB
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adapted Genomics registration to enable select button if patient exists but no attached request - previously was blocked if patient registered and request not subsequently submitted
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10 years ago
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PatientCase.pm
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6kB
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RfC447 - cannot delete sole patient case during registration process * consequence is patient cannot be found on registration search but also cannot be re-registered if it has an nhs number * can now only edit sole patient case, delete option only available for multiple patient cases
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7 years ago
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PhoneLog.pm
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1kB
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hilis3 conversion scripts for YHHN
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15 years ago
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PrintRun.pm
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12kB
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removed copy-to from request_ids, now generated at end of file in own section; corrected bugfixes & omissions
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8 years ago
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ReferralSource.pm
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11kB
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patched C::Ajax::get_parent_organisations() and corresponding model method to accept flag for practices lookup; create new GP practice allows submission of parent practice id for branch practices
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14 years ago
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Referrer.pm
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12kB
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cgiapp_prerun() skips redirect for report notification request; new report_notification search function; function for user to register for report notifications; moved DBIxSimple::dump_query to Local::Utils for sharing with Local::DB; get_practitioner_by_code() now shared with report_notification so loads speculatively; replaced report_available_notification.pl queries with new Local::DB::insert_or_update_if_greater
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9 years ago
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Report.pm
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5kB
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added storage module logging; new storage.t; adapted vialId validation to recognise 10-digit ids in addition to leading 2 alphabetical chars; bugfix to storage edit function - requied to capture vialId as well as request_id for validation failure return to edit(); added new fields to DNA extraction worksheet
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10 years ago
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Request.pm
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47kB
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Remove debug code
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7 years ago
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RequestAudit.pm
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2kB
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hilis3 conversion scripts for YHHN
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15 years ago
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RequestOption.pm
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942B
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changed method of determining whether lab test supported by specimen type from lab-section specimen types datamap to lab-test specimen types datamap
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12 years ago
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Result.pm
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30kB
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Refactor icdo_category table to include only sub-categories - renamed to icdo_sub_category
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7 years ago
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Screen.pm
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11kB
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moved storage vial deletion validation to DFV method and added 'reason for deletion' form field; added centre id to mail_reports.pl cron log entry; ppm_and_results.pl uses IPC::System::Simple to capture more explicit tar error (was returning 'cannot stat file' msg without script name & location info); added inadequate unfixed specimen to weekly notifications
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9 years ago
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Specimen.pm
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6kB
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bugfix - update_specimen_lab_tests() fatal error if no specimen id's passed in due to flawed array construction (contained single undef value)
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10 years ago
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Storage.pm
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12kB
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* new test file for storage racks data (transfer last part of storage.t) * fix tt error due to addition of undef value (data.failed) * fix incorrect 'well_max' value in _test_data hashref
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8 years ago
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Test.pm
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3kB
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replaced loading of Local::DBIxSimple in individual model classes with single loading in Model::Base; renamed DBIxSimple::get_meta to dbix_get_meta to avoid clash with Model::Base::get_meta (now renamed get_meta_data); fixed report.t - new method report_diff replaced comment
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12 years ago
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User.pm
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20kB
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Preparation for Deb9 migration: adapt tests to run on new deployment (not Deb9 specific) new test file for required file & db resources disable 'Dummy' driver for CAP::Authentication - caused fatal errors when session did not match username in dev env
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7 years ago
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Validation.pm
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2kB
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applied same server-side validation to storage vialId as already done by ajax, factored out common regex to LLU; moved M::Ajax::check_storage_vialId() to M::Validation::has_storage_vialId(); applied check that patient entry exists to C::Patient::_check_nhs_number_usage() for PID change, but not implemented as creation of new patient works OK; alphabetically sorted lims_messages.pl dfv section
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11 years ago
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WorkList.pm
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18kB
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NGIS updates * WGS worklist returns HTML if no requests * WGS worklist & data extraction scripts use flow results summary not diagnosis to set NGIS test code * update service name from GeNEQ to YNEGLH
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6 years ago
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