package LIMS::Controller::Admin::Lab::Test; use strict; use base 'LIMS::Controller::Admin'; use Data::Dumper; __PACKAGE__->authz->authz_runmodes( ':all' => 'do_admin' ); #------------------------------------------------------------------------------- sub default : StartRunmode { my $self = shift; $self->_debug_path($self->get_current_runmode); my $errs = shift; # DEBUG $errs; # first check we have at least 1 lab section defined: unless ($self->have_lab_sections) { $self->stash( error_msg => $self->messages('admin')->{no_sections} ); return $self->forward('missing_data'); } # get list of lab_sections table data: my $sections = $self->model('LabSection')->get_lab_sections(); unless ($sections) { $self->stash( error_msg => $self->messages('admin')->{no_sections} ); } my %args = (); if ( my $lab_section_id = $self->query->param('lab_section_id') ) { $args{lab_section_id} = $lab_section_id; } my $total = $self->model('LabTest')->get_lab_tests_count(\%args); $args{sort_by} = $self->query->param('sort_by') || ['lab_section_id', 'field_label']; if ( $total > $self->cfg('settings')->{entries_per_page} ) { # invoke pager for template and add limit & offset params to \%args: $self->pager({ query => \%args, total => $total }); } # get list of all lab_tests (restricted by lab_section_id if supplied): my $tests = $self->model('LabTest')->get_lab_tests(\%args); { # get list of specimen types: my $data = $self->_get_specimen_types(); $self->tt_params( specimen_types => $data ); } { # get current lab_test specimen_types: my $map = $self->_get_lab_test_specimen_types(); $self->tt_params( lab_test_specimen_types => $map ); } { # get current lab_section specimen_types: my $map = $self->_get_lab_section_specimen_types(); $self->tt_params( lab_section_specimen_types => $map ); } { # data types for all lab-tests: my $map = $self->lab_test_data_types_map; # warn Dumper $data_map; $self->tt_params( lab_test_data_types => $map ); } { # test data types: my $o = $self->model('Base') ->get_objects('LabTestResultDataType', { sort_by => 'description' }); $self->tt_params( data_types => $o ); # warn Dumper $o; } $self->tt_params( tests => $tests, sections => $sections, ); # get js validation foo_onsubmit & foo_dfv_js vars into tt_params: $self->js_validation_profile('lab_tests'); return $self->tt_process($errs); } #------------------------------------------------------------------------------- sub edit : Runmode { my $self = shift; $self->_debug_path($self->get_current_runmode); my $errs = shift; # $self->stash( errs => $errs ); my $id = $self->param('id') || return $self->error('no id passed to '.$self->get_current_runmode); # $self->debug('id:'.$id); { # lab tests: my $data = $self->model('LabTest')->get_lab_test($id); $self->tt_params( data => $data ); } { # lab sections: my $sections = $self->model('LabSection')->get_lab_sections(); # no need to sort $self->tt_params( sections => $sections ); } { # get list of specimen types: my $data = $self->_get_specimen_types(); $self->tt_params( specimen_types => $data ); } { # get lab_section specimen_types: my $map = $self->_get_lab_section_specimen_types(); $self->tt_params( section_specimen_types => $map ); } { # get lab_test specimen_types for this lab_test.id:: my $map = $self->_get_lab_test_specimen_types(); # warn Dumper $map; $self->tt_params( lab_test_specimen_types => $map->{$id} ); } { # data type: my $map = $self->lab_test_data_types_map; # warn Dumper $map; my $data_type = $map->{$id}->{description}; $self->tt_params( test_data_type => $data_type ); } { # test data types: my $o = $self->model('Base') ->get_objects('LabTestResultDataType', { sort_by => 'description' }); $self->tt_params( data_types => $o ); # warn Dumper $o; } # get js validation foo_onsubmit & foo_dfv_js vars into tt_params: $self->js_validation_profile('lab_tests'); return $self->tt_process($errs); } #------------------------------------------------------------------------------- sub update : Runmode { my $self = shift; $self->_debug_path($self->get_current_runmode); my $id = $self->param('id'); # put id (if submitted) into params() as _record_id for validation: if ( $id ) { $self->query->param( _record_id => $id ); } # if param 'id' passed, return error to edit(): my $error_rm = $id ? 'edit' : 'default'; my $dfv = $self->check_rm($error_rm, $self->validate('lab_tests') ) || return $self->dfv_error_page; my $data = $dfv->valid || return $self->forward('default'); # eg if empty param # provide 'id' if supplied, so record updated, otherwise new one created: if ($id) { $data->{id} = $id; } my $rtn = $self->model('LabTest')->update_lab_tests($data); return $self->error($rtn) if $rtn; my $messages = $self->messages('action'); my $msg = $id ? $messages->{edit_success} : $messages->{create_success}; $self->flash( info => $msg ); my $return_addr = $self->query->param('ukas_accredited') ? '/admin/lab_test_accreditation' : '/admin/lab_test'; $self->redirect( $self->query->url . $return_addr ); } #------------------------------------------------------------------------------- sub _get_lab_section_specimen_types { # get current lab_section specimen_types: my $self = shift; my $o = $self->model('Base')->get_objects('LabSectionSampleType'); my $map; for (@$o) { $map->{$_->lab_section_id}->{$_->sample_type_id}++; } return $map; } #------------------------------------------------------------------------------- sub _get_lab_test_specimen_types { # get current lab_section specimen_types: my $self = shift; my $o = $self->model('Base')->get_objects('LabTestSampleType'); my $map; for (@$o) { $map->{$_->lab_test_id}->{$_->sample_type_id}++; } return $map; } #------------------------------------------------------------------------------- sub _get_specimen_types { # get list of specimen types: my $self = shift; my $args = { sort_by => 'id' }; my $o = $self->model('Base')->get_objects('SampleType', $args); return $o; } 1;