[% content_only = 1 # no html wrappers %]
[% IF requests.size AND NOT c.stash.render_pdf %]ENSURE PRINT BACKGROUND COLOURS SETTING IS ON AND PAGE MARGINS ARE SET TO ZERO IN PRINTER SETUP
[% site.html.back_button %]
[% END %] [% # INCLUDE dumper.tt dump = t.as_tree FOREACH t IN ngis_tests %] [% IF requests.size; FOREACH r IN requests; # INCLUDE dumper.tt dump = r.as_tree; result_summary = r.results_summary.results_summary; patient = r.patient_case.patient; # sample_dispatched & germline requests: FOREACH t IN r.lab_test_results; # INCLUDE dumper.tt dump = t.as_tree; NEXT UNLESS t.lab_test.test_name.match('sample_type'); sample_dispatched = t.result; LAST; END; # INCLUDE dumper.tt dump = sample_dispatched; germline = 1 IF NOT sample_dispatched.match('[Bb]lood|marrow'); # ngis test codes: FOREACH t IN ngis_tests; # INCLUDE dumper.tt dump = t.as_tree; # TODO: how to link ngis_test_code to results_summary ? END; %]Version 1.12
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Genomic Medicine Service
Whole Genome Sequencing (WGS) Test Request
PLEASE DO NOT USE FOR NON-WGS TESTS
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| Requesting organisation: [% r.patient_case.referral_source.display_name %] | |
| GLH laboratory to receive sample: YNEGLH Leeds Central Lab | Test Required Whole Genome Sequencing |
| Patient first name: [% patient.first_name.ucfirst %] |
Ethnicity (please tick on page 2)
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| Patient last name: [% patient.last_name.upper %] |
Test Directory Clinical Indication & code
[% # TODO: this should be derived from ngis_lab_test data
IF result_summary.match('AML|myeloid'); 'M80.1';
ELSIF result_summary.match('ALL|lymphoblastic'); 'M91.1';
END;
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Date of birth [% patient.dob.dmy('/') %] |
Hospital number
[% r.patient_case.unit_number %]
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Gender
Male
Female
Other / Unknown
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Presentation status
First diagnosis
Recurrence/relapse
Unknown
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NHS number (or postcode if not known)
[% INCLUDE site/nhs_number.tt
nhs_number = patient.nhs_number; %]
[% IF NOT patient.nhs_number %]
Reason NHS number not available:
Patient is a foreign national
Other (provide reason)
[% END %]
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Additional clinical information (if relevant)
eg previous tumours, molecular testing,
and relevant treatment history with dates
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| Solid tumour requests only | |||
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Primary
Metastatic
Lymphoma
Unknown
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Histopathology lab ID
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Additional tumour information (if relevant)
eg site of metastasis (if metastatic), or
unknown primary
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Date of this diagnosis
dd/mm/yyyy
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Tumour topography | Tumour morphology | |
| Haemato-oncology liquid tumour requests only | ||
|---|---|---|
| AML ALL Other (please specify) |
Local sample ID
[% UNLESS germline; INCLUDE site/lab_number.tt data = r;
END %]
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Date of this diagnosis
[% r.results_summary.time.dmy('/') %]
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| Complete for tumour samples | ||||
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| Fresh frozen tumour Bone marrow Blood (EDTA) Other (please specify): | ||||
| % malignant nuclei / blasts or equivalent in this sample (refer to sample handling guidance) must be provided below | ||||
| Local sample tube ID | Collection date / time | % malignant nuclei / blasts | nucleated cell count | volume required |
| x109/L | µL | |||
| Complete for germline samples | |||
|---|---|---|---|
| Blood (EDTA) Saliva Fibroblasts Skin biopsy Other (please specify): | |||
| Local sample ID | Collection date / time | Sample volume if applicable | Comments |
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[% IF germline;
INCLUDE site/lab_number.tt data = r; END %]
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| Consultant details | |
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Responsible consultant:
[% r.referrer_department.referrer.name %]
Department:
[% r.referrer_department.hospital_department.display_name %]
Phone:
Email:
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Main contact (if different from responsible consultant)
Name:
Department:
Phone:
Email:
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| [% patient.first_name.ucfirst %] [% patient.last_name.upper %] :: [% patient.dob.dmy('/') %] :: [% patient.nhs_number OR r.patient_case.unit_number %] (page 2 of 2) |
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| White | Mixed | Asian or Asian British | Black or Black British | Other Ethnic Group |
|---|---|---|---|---|
| A British | D White and Black Caribbean | H Indian | M Caribbean | R Chinese |
| B Irish | E White and Black African | I Pakistani | N African | S Any other ethnic group |
| C Any other White background | F White and Asian | J Bangladeshi | O Any other Black background | |
| G Any other mixed background | L Any other Asian background | Z Not stated |
| Type - O (Test order/Case ID), P (local patient ID), S (local sample identifier) | ||
|---|---|---|
| Organisation | Type | Identifier |
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[% END %]