package LIMS::Controller::HMRN::Data; use Moose; with ( 'LIMS::Controller::Roles::Misc', # redirect_after_edit_success() 'LIMS::Controller::Roles::FormData', # validate_form_params() ); BEGIN { extends 'LIMS::Base'; } __PACKAGE__->meta->make_immutable(inline_constructor => 0); use Data::Dumper; #__PACKAGE__->authz->authz_runmodes( ':all' => 'view_clinical_data' ); # ------------------------------------------------------------------------------ # default() should never be called direct - redirect to start page: sub default : StartRunmode { my $self = shift; $self->_debug_path($self->get_current_runmode); return $self->redirect( $self->query->url ); } # ------------------------------------------------------------------------------ sub load : Runmode { # initial point of entry ie /hmrn_data/=/nnn return shift->forward('hmrn'); # just forward } # ------------------------------------------------------------------------------ sub hmrn : Runmode { my $self = shift; $self->_debug_path($self->get_current_runmode); my $errs = shift; $self->stash( errs => $errs ); # for debugging in tmpl return $self->forbidden() unless $self->user_can('view_clinical_data'); my $request_id = $self->param('id') || return $self->error('no id passed to '.$self->get_current_runmode); # get request data: my $request_data = $self->model('Request')->get_single_request($request_id); $self->tt_params( request_data => $request_data ); my $patient_id = $request_data->patient_case->patient_id; { # get request history: my $history = $self->model('History')->get_request_history($request_id); # create hash with keys = action & values = associated history object: my %request_history = map { $_->action => $_ } @$history; $self->tt_params( request_history => \%request_history ); } { # get patient demographic data: my $demographics = $self->model('HMRN')->get_patient_demographics($patient_id); $self->tt_params( demographic_data => $demographics ); } { # get hmrn data: my $vars = $self->query->Vars(); # might be required by model if validation failure my $hmrn_data = $self->model('HMRN')->get_all_hmrn_data($patient_id, $vars); # is patient also in outreach (can't edit GP practice if so): if ($self->cfg('settings')->{have_outreach}) { my $in_outreach = $self->model('HMRN')->is_in_outreach($patient_id); $hmrn_data->{is_in_outreach} = $in_outreach; } $self->tt_params( hmrn_data => $hmrn_data ); } { # validation profiles: my %validation_profile = (); my $param_constraints = $self->model('HMRN')->get_parameter_constraints; $validation_profile{constraints} = $param_constraints; for my $type( qw/lymphoid myeloid precursor plasmacell/ ) { my $profile = $self->validate('hmrn_'.$type); # warn Dumper $profile; my %required = map { $_ => 1 } @{ $profile->{required} }; $validation_profile{required_fields}{$type} = \%required; } $self->tt_params( validation_profile => \%validation_profile ); } return $self->tt_process($errs); } # ------------------------------------------------------------------------------ # handles all lymphoid, myeloid, precursor & plasma-cell data, expects hidden 'data_set': sub edit : Runmode { my $self = shift; $self->_debug_path($self->get_current_runmode); return $self->forbidden() unless $self->user_can('enter_clinical_data'); my $data_type = $self->query->param('data_set') || return $self->error('no data_set type passed to '.$self->get_current_runmode); my $profile = 'hmrn_'.$data_type; my $dfv = $self->check_rm( 'hmrn', $self->validate($profile) ) || return $self->dfv_error_page; my $request_id = $self->param('id') || return $self->error('no request_id passed to '.$self->get_current_runmode); my $patient_id = $self->param('Id') || return $self->error('no patient_id passed to '.$self->get_current_runmode); my $data = $dfv->valid; # warn Dumper $data; my %args = ( data => $data, data_type => $data_type, patient_id => $patient_id, ); my $rtn = $self->model('HMRN')->update_params(\%args); return $rtn ? $self->error($rtn) : $self->redirect_after_edit_success('/hmrn_data/=/' . $request_id); } # ------------------------------------------------------------------------------ sub staging : Runmode { my $self = shift; $self->_debug_path($self->get_current_runmode); return $self->forbidden() unless $self->user_can('enter_clinical_data'); my $request_id = $self->param('id') || return $self->error('no request_id passed to '.$self->get_current_runmode); my $patient_id = $self->param('id') || return $self->error('no patient_id passed to '.$self->get_current_runmode); # just need to pass form fields as array(ref) to model: my @vars = $self->query->param(); # warn Dumper \@vars; my %data = ( patient_id => $patient_id, form_params => \@vars, ); my $rtn = $self->model('HMRN')->update_staging_data(\%data); return $rtn ? $self->error($rtn) : $self->redirect_after_edit_success('/hmrn_data/=/' . $request_id); } # ------------------------------------------------------------------------------ sub comment : Runmode { my $self = shift; $self->_debug_path($self->get_current_runmode); return $self->forbidden() unless $self->user_can('enter_clinical_data'); my $request_id = $self->param('id') || return $self->error('no request_id passed to '.$self->get_current_runmode); my $patient_id = $self->param('Id') || return $self->error('no patient_id passed to '.$self->get_current_runmode); my $data = $self->query->Vars(); # only single param passed - 'comment' $data->{patient_id} = $patient_id; my $rtn = $self->model('HMRN')->update_comment($data); return $rtn ? $self->error($rtn) : $self->redirect_after_edit_success('/hmrn_data/=/' . $request_id); } # ------------------------------------------------------------------------------ sub view_history : Runmode { my $self = shift; $self->_debug_path($self->get_current_runmode); return $self->forbidden() unless $self->user_can('enter_clinical_data'); my $patient_id = $self->param('id') || return $self->error('no patient_id passed to '.$self->get_current_runmode); my $data = $self->model('HMRN')->get_history($patient_id); $self->tt_params( data => $data ); return $self->tt_process(); } # ------------------------------------------------------------------------------ sub edit_demographics : Runmode { my $self = shift; $self->_debug_path($self->get_current_runmode); return $self->forbidden() unless $self->user_can('enter_clinical_data'); my $dfv = $self->check_rm( 'hmrn', $self->validate('hmrn_demographics') ) || return $self->dfv_error_page; my $request_id = $self->param('id') || return $self->error('no request_id passed to '.$self->get_current_runmode); my $patient_id = $self->param('Id') || return $self->error('no patient_id passed to '.$self->get_current_runmode); my $data = $dfv->valid; # add patient_id: $data->{patient_id} = $patient_id; # warn Dumper $data; my $rtn = $self->model('HMRN')->update_patient_demographics($data); return $rtn ? $self->error($rtn) : $self->redirect_after_edit_success('/hmrn_data/=/' . $request_id); } # ------------------------------------------------------------------------------ sub edit_chronology : Runmode { my $self = shift; $self->_debug_path($self->get_current_runmode); return $self->forbidden() unless $self->user_can('enter_clinical_data'); my $dfv = $self->check_rm( 'hmrn', $self->validate('hmrn_chronologies') ) || return $self->dfv_error_page; my $request_id = $self->param('id') || return $self->error('no request_id passed to '.$self->get_current_runmode); my $patient_id = $self->param('Id') || return $self->error('no patient_id passed to '.$self->get_current_runmode); my $data = $dfv->valid; # add patient_id: $data->{patient_id} = $patient_id; my $rtn = $self->model('HMRN')->update_patient_chronologies($data); return $rtn ? $self->error($rtn) : $self->redirect_after_edit_success('/hmrn_data/=/' . $request_id); } # ------------------------------------------------------------------------------ sub edit_antecedent : Runmode { my $self = shift; $self->_debug_path($self->get_current_runmode); return $self->forbidden() unless $self->user_can('enter_clinical_data'); my $request_id = $self->param('id') || return $self->error('no request_id passed to '.$self->get_current_runmode); my $patient_id = $self->param('Id') || return $self->error('no patient_id passed to '.$self->get_current_runmode); my $vars = $self->query->Vars; # add patient_id: $vars->{patient_id} = $patient_id; my $rtn = $self->model('HMRN')->update_antecedent_events($vars); return $rtn ? $self->error($rtn) : $self->redirect_after_edit_success('/hmrn_data/=/' . $request_id); } # ------------------------------------------------------------------------------ sub new_treatment : Runmode { my $self = shift; $self->_debug_path($self->get_current_runmode); return $self->forbidden() unless $self->user_can('enter_clinical_data'); my $dfv = $self->check_rm( 'hmrn', $self->validate('hmrn_treatment') ) || return $self->dfv_error_page; my $request_id = $self->param('id') || return $self->error('no request_id passed to '.$self->get_current_runmode); my $patient_id = $self->param('Id') || return $self->error('no patient_id passed to '.$self->get_current_runmode); my $data = $dfv->valid(); # add patient_id: $data->{patient_id} = $patient_id; my $rtn = $self->model('HMRN')->new_treatment_data($data); return $rtn ? $self->error($rtn) : $self->redirect_after_edit_success('/hmrn_data/=/' . $request_id); } # ------------------------------------------------------------------------------ sub edit_treatment : Runmode { my $self = shift; $self->_debug_path($self->get_current_runmode); my $errs = shift; return $self->forbidden() unless $self->user_can('enter_clinical_data'); my $request_id = $self->param('id') || return $self->error('no request_id passed to '.$self->get_current_runmode); my $treatment_id = $self->param('Id') # treatment table 'id' || return $self->error('no id passed to '.$self->get_current_runmode); my $data = $self->model('HMRN')->get_treatment_data($treatment_id); # put request_id into $data: $data->{request_id} = $request_id; $self->tt_params(data => $data); # for jquery validation (date functions don't work with DatePicker): # $self->tt_params( profile_name => 'hmrn_treatment' ); return $self->tt_process($errs); } # ------------------------------------------------------------------------------ sub do_edit_treatment : Runmode { my $self = shift; $self->_debug_path($self->get_current_runmode); return $self->forbidden() unless $self->user_can('enter_clinical_data'); my $request_id = $self->param('id') || return $self->error('no request_id passed to '.$self->get_current_runmode); my $treatment_id = $self->param('Id') # treatment table 'id' || return $self->error('no id passed to '.$self->get_current_runmode); my $rtn; if ( $self->query->param('delete') ) { return $self->forward('edit_treatment') unless $self->query->param('confirm_delete'); $rtn = $self->model('HMRN')->delete_treatment_data($treatment_id); # just send id for del $self->flash( info => $self->messages('action')->{delete_success} ) if ! $rtn; } else { my $dfv = $self->check_rm( 'edit_treatment', $self->validate('hmrn_treatment') ) || return $self->dfv_error_page; my $data = $dfv->valid(); # put treatment table 'id' into $vars: $data->{id} = $treatment_id; warn Dumper $data; return 1; $rtn = $self->model('HMRN')->update_treatment_data($data); $self->flash( info => $self->messages('action')->{edit_success} ) if ! $rtn; } return $rtn ? $self->error($rtn) : $self->redirect( $self->query->url . '/hmrn_data/=/' . $request_id); } # ------------------------------------------------------------------------------ sub edit_mdt_date : Runmode { my $self = shift; $self->_debug_path($self->get_current_runmode); return $self->forbidden() unless $self->user_can('enter_clinical_data'); my $request_id = $self->param('id') || return $self->error('no request_id passed to '.$self->get_current_runmode); my $id = $self->param('Id') || return $self->error('no id passed to '.$self->get_current_runmode); my $vars = $self->query->Vars(); my $rtn; # for jquery validation (does't work with DatePicker): # $self->tt_params( profile_name => 'hmrn_mdt_date' ); # deletion request: if ($vars->{delete}) { # NB: do this 1st as var 'date' also passed return $self->fill_form($self->tt_process) # require confirmation before deleting: unless $self->query->param('confirm_delete'); $rtn = $self->model('HMRN')->delete_mdt_date($id); # just send id for del $self->flash( info => $self->messages('action')->{delete_success} ) if ! $rtn; } # if revised date submitted: elsif ($vars->{date}) { # validate date: my $profile = $self->validate('hmrn_mdt_date'); my $dfv = $self->validate_form_params($profile); if ($dfv->has_invalid) { # $dfv->has_missing not req'd - wouldn't get here $self->tt_params(dfv_err => $dfv->msgs); # warn Dumper $dfv->msgs; return $self->fill_form($self->tt_process); } $vars->{id} = $id; # add row id for update $rtn = $self->model('HMRN')->update_mdt_date($vars); $self->flash( info => $self->messages('action')->{edit_success} ) if ! $rtn; } else { # 1st call to method (just get data): my $data = $self->model('HMRN')->get_mdt_data($id); return $self->tt_process({ data => $data }); } return $rtn ? $self->error($rtn) : $self->redirect( $self->query->url . '/hmrn_data/=/' . $request_id); } # ------------------------------------------------------------------------------ sub edit_practice : Runmode { my $self = shift; $self->_debug_path($self->get_current_runmode); return $self->forbidden() unless $self->user_can('enter_clinical_data'); my $request_id = $self->param('id') || return $self->error('no request_id passed to '.$self->get_current_runmode); my $patient_id = $self->param('Id') || return $self->error('no patient_id passed to '.$self->get_current_runmode); # if new practice_id submitted: if ( my $practice_id = $self->query->param('practice_id') ) { my %data = ( patient_id => $patient_id, practice_id => $practice_id, ); my $rtn = $self->model('HMRN')->update_patient_demographics(\%data); return $rtn ? $self->error($rtn) : $self->redirect_after_edit_success('/hmrn_data/=/' . $request_id); } else { # load existing for editing: # get current practice_id for patient: my $info = $self->model('HMRN')->get_patient_demographics($patient_id); return $self->tt_process({ data => $info }); } } # ------------------------------------------------------------------------------ # ajax function called from treatment type select menu: sub treatment_options : Runmode { my $self = shift; $self->_debug_path($self->get_current_runmode); my $options = []; if ( my $tx_type_id = $self->query->param('tx_type_id') ) { # warn $tx_type_id; $options = $self->model('HMRN')->get_tx_details_for_tx_type($tx_type_id); } return $self->tt_process({ options => $options }); } 1;