add GQ to contacts list; new field for genomics_data

new 100K genomes notification script

add new recipient to ngs_myeloid_screening.pl; adapt to accept command-line args

new script for emailing CML patients not achieving MMR

new script to email new acute non-myeloid leukaemias

new script to clear backlog of Genomics xml files in case of remote ftp server failure

split Genomics HaemOnc SLF into 2 pdf's to prevent position alignment slippage over multiple requests; tidy up contacts.lib

genomics validation failure notifies relevant centre (Leeds or Sheffield); added update to patient table as trigger for xml data transfer, and initial port to SQL::Abstract::More method of generating query, but far too slow; minor improvement for recent bugfix to linked/default.tt

added diagnosis context warnings as static view for non-admin users - moved common code to C::Roles::Misc; appended new International Scale result to imatinib tt; adapted Imatinib chart to handle change to International Standard of reporting scheduled for mid-2017; HTS myeloid sequencing set to chargeable outside Y&H region; added Genomcis consent date to Consent update section & added new menu option; email address change for PNH service

replaced nycris data file scp transfer with email password-protected file; recovered vm disk corruption - last good backup saved in M:\ as pre-vm-corruption-work-2016_0604.gz

new function to return pdf report for outreach_patient_access; renamed remodlb_alert.pl -> new_trial_cases.pl for more generic useage

moved barcode generation to new C::Role::Barcode; simplfied M::Local::genomics_sample_linkage_form() query - dbix only

patched QueryLog again to return query logging function to console for devel server; email address changes

patched genomic_xml script - error in gel_id generation; moved receiving_system & receiving_facility hl7 items to object constructor; reverted QueryLog to return if fastcgi - logging process size was killing print run - change introduced on live system 23/3/16

new cytogenetics_failed cron