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October 16, 2017

Browse Changes

improve genomics validation failure message for family ID change path to genomics_xml.pl for genomics_xml.t suppress 'validated OK' message with -q flag

a057bd43eec32ab21d3e6422e51915bb6a6e2fb9 a057bd43

RAJ authored on 16/10/2017 11:36:21

September 27, 2017

Browse Changes

minor tweak to xml_validate.pl for clarity

5791819392042dab24e6929a49fdf92751ac8ac5 57918193

RAJ authored on 27/09/2017 11:01:48

September 26, 2017

Browse Changes

adapt xml_validate.pl to run as cron to email validation failues

84b5a16499550650975445f97522f64fde2d3c47 84b5a164

RAJ authored on 26/09/2017 17:26:23
Browse Changes

* add new Genomics v3.2 fields to validation function * expand validation error description on some Genomics results * add BHODS HL7 script

b7ee043e7df3d8f1902b9604610bcf221eadb4a8 b7ee043e

RAJ authored on 26/09/2017 14:42:07

August 16, 2017

Browse Changes

update crontab.txt with current cron tasks; add new entry to genomics_notifications.pl; add getopts to xml_validate.pl

c6db802f87bafa2a4cbb162c13fe71dc1361891f c6db802f

RAJ authored on 16/08/2017 10:54:00

June 13, 2017

Browse Changes

created error code map for genomics participant ID error (previously got undefined variable warning); new function to expand 30-character result limit for Genomics data; Genomics v3.2 deployment script updates

34bdfd6f77cf405c644241cc13a5e67bf86532e9 34bdfd6f

RAJ authored on 13/06/2017 22:13:09

April 27, 2017

Browse Changes

moved error reformatting to GenomicsValidation for sharing between genomics_xml.pl & xml_validate.pl; replaced message formatting mess with Template

c8e72f1d25a5e3b46b900eff11aca4f6c8a57317 c8e72f1d

RAJ authored on 27/04/2017 23:25:29

December 23, 2016

Browse Changes

bugfixes to genomics validation scripts; remove numbers from new section names format; rearranged schema update - more efficient using sql variables

e88a0be7f6ae147ec54c995b8155333b95c4e490 e88a0be7

RAJ authored on 23/12/2016 13:07:29

November 25, 2016

Browse Changes

moved xml and param validation out of xml_validation.pl and genomics_xml.pl into new LL::GenomicsValidation class

d4658262e478e83ef05589d86934e3989ebb9ec7 d4658262

RAJ authored on 25/11/2016 16:38:56
Browse Changes

tightened family_id validation to match existing participant_id + 1st 3 digits of participant_id base range

71d9143df6c3e6f095f73a60bc46c33dd3f54332 71d9143d

RAJ authored on 25/11/2016 14:43:56

August 24, 2016

Browse Changes

participant_id comparison uses Local::Utils::matches() to handle numerical or non-numerical values

3b1462d607276769abf00f47baf8b1e68c9969f9 3b1462d6

RAJ authored on 24/08/2016 12:56:36
Browse Changes

modified previous validation - wasn't compatible with test/UAT participant ID blocks

2cf6facf79a614bcdbc7d901ee557ff4592d04ba 2cf6facf

RAJ authored on 24/08/2016 10:50:16
Browse Changes

added participant_id validation

3847da19e635f7c4f9f441211ad83dffd60abbb1 3847da19

RAJ authored on 24/08/2016 09:55:15

August 17, 2016

Browse Changes

removed invalid xml participant id entry 'UNKNOWN' if request unscreened

af3ab301b40a8d4f6655e000efa5d58dcfa16889 af3ab301

RAJ authored on 17/08/2016 13:31:10

August 11, 2016

Browse Changes

bugfixes: don't skip request if validation fails for genomics.t; can't use content_contains on string with line-break

17ad59764c25c3b759c19bfb98f36ef9ce4af69b 17ad5976

RAJ authored on 11/08/2016 14:56:19