minor updates to tt & crons

standardised getopts 'd' for scripts using days * for inter-script consistency and disambiguity with 't' (for testing)

added command-line options to crons to allow default duration override

bugfix - failure to update request_result_summary timestamp col on result_summary update causing premature locking of records; action logged in request history when request status set to complete by incomplete_requests.pl or M::R::RequestUpdate::update_request_status; adapted incomplete_requests.pl to include status complete requests with diagnosis awaiting final diagnosis/review; ScriptHelpers::do_request_history renamed to log_diagnosis_alert to avoid conflict with M::R::HistoryAction method of same name; nav bar loads HMRN link if user has either view_outreach_data or edit_outreach_data permissions; L::Role::DiagnosisConfirm::diagnosis_confirmation_required hash of lab_sections renamed from %map to %required for clarity

removed all BEGIN blocks from cron scripts - need to load Data::Dumper's Carp from local::lib before system Carp gets any chance of loading

added USE_FILE_SESSIONS flag to C::R::RecordHandler::_format_report() for use in chart url if called via cron, to force file sessions instead of creating new db session

new_pnh_alert, juvenile_diagnosis_status_alert & chest_clinic_diagnosis_alert log sucessful emails to request_history; refactored some repeated code in ScriptHelpers

outreach charts don't plot unless 2 or more datasets; added find GP by practice function to outreach demographics; set permissions mode on all crons so svk revert on production doesn't revert to 644; set results summary to default open on report page - correctly this time

some cron edits

bugfixes to cron scripts

new myelomaX_data.pl cron; moved emailing function out of all crons (except mail_reports.pl) to new ScriptHelpers::send_mail() function

modified M::Roles::ScreenUpdate::_get_auto_screen_data() to handle a HoH for match criteria data to enable multiple criteria to be tested (eg clinical trial AND specimen type); new remodlb_alert.pl cron

added path to local perl lib to cron scripts; modifications to activity_data.pl; added additional highlighting to outreach limits & ranges

hilis3 conversion scripts for YHHN