enabled config option to set ftp transfer to passive mode; fixed genomics.t - presence of real file on live server causing test to fail due to XMLin creating single file as scalar value - requires arrayref to match Data::Dumper

bugfix - failure to update request_result_summary timestamp col on result_summary update causing premature locking of records; action logged in request history when request status set to complete by incomplete_requests.pl or M::R::RequestUpdate::update_request_status; adapted incomplete_requests.pl to include status complete requests with diagnosis awaiting final diagnosis/review; ScriptHelpers::do_request_history renamed to log_diagnosis_alert to avoid conflict with M::R::HistoryAction method of same name; nav bar loads HMRN link if user has either view_outreach_data or edit_outreach_data permissions; L::Role::DiagnosisConfirm::diagnosis_confirmation_required hash of lab_sections renamed from %map to %required for clarity

created new setting sysadmin_email to receive system messages, distinct from local admin eg user applications

new DakoLink (ULISA) worklist function

changed outreach pack return date from ref + 1 month to ref + 40 days; added test_only override to L::ScriptHelpers::send_message()

integrated date_contraints.tt with user stats; chnaged outreach interim report to show diagnosis & comment when authorised, not just reported; ScriptHelpers::mail_admin() accepts 'subject' arg

patched L::L::DBIxSimple to handle omiholders and placeholders in same query; new dbix-simple.t to test it; moved loop queries to data-maps in activity_data.pl; replace pipe-delimited file with xl file in gallium data for quintiles

patched all M::Email::send_message() returns to handle Return::Value object instead of string/undef

new function to exempt certain patient names from PDS/SMS lookup; removed recently discontinued email methods

new gallium trial data cron

MAJOR CHANGE: combined send_message and send_attachment into a single method dispatch() in L::Local::Mail - consistently returns a Return::Value object so no longer handling returns from simple mail and attachments differerntly - affects app and crons; fix for resources meter chart for swap mem on Deb6 VM; patched M::Outreach::update_followup() to prevent unnecessary db lookups for non-duration followup (eg other), and prevented crash when attempting to update non-existant table entry; moved loading of local-lib above FindBin in hilis4.fcgi to avoid fastcgi error in Deb6 VM

MAJOR CHANGE: moved sql_lib() from M::Base to new M::Role::Query; moved all M::R::QueryFormatter methods into M::R::Query; removed sql_lib() from ScriptHelpers - using new M::Roles::Query method; removed lims_dbix() from M::Base - now loaded via M::Role::DBIxSimple on demand; moved get_sql_with_constraint() from M::R::DBIxSimple to M::R::Query; method gets dbh from lims_db not lims_dbix in M::LabSection::update_lab_sections() & M::Specimen::update_specimens(); added elements() to Local::QueryLibrary

added full_path accessor to ScriptHelpers to allow scripts at other relative paths to use ScriptHelper methods; lantronix now has functional admin_alert for corrupt data streams

refactored L::Utils::get_yaml to only require args needed for construction of path/to/yaml_dir/filename to remove duplication from components requiring a get_yaml_file() method (Controllers, Model & ScriptHelpers)

added get_yaml_file method to L::Model::Base for use by L::L::R::DiagnosisConfirm; moved all instances of YAML::Tiny->read code to L::Local::Utils