split outreach charts into 2 to accomodate CML outreach; added better date handling routine for charts; changed auto-screening handling of specimen code for CML outreach requests; bugfixes to HMRN to remove legacy 'chronologies' table entries; removed redundant code/queries for error_codes.pl script
exempted Outreach report from requesting additional tests based on diagnosis; modified M::R::ScreenUpdate::do_auto_screen() to add lab test details if configured for screening term
MAJOR CHANGES: search form uses jQuery watermark instead of dd-mm-yyyy display - changed date-field validation to accommodate; moved do_new_lab_test() method out of M::Role::ScreenUpdate to new M::Role::LabTestUpdate to share function with auto-requesting tests at diagnosis/authorissation; changed 'teaching' field to radio button in report page and changed handling of report_option fields in M::Roles::ReportUpdate::do_additional_options() - all request_options were being cleared during report stage; added updated_at timestamp field in M::Roles::ReportUpdate::do_request_report() to any unchanged request_report object to trigger mail_report.pl on authorised cases - were being missed as updated_at col was not being modified
added _parse_data_val() function to C::Roles::Chart to return ::NoValue for null vals, so setGapColor() works as intended; moved make_chart logic from report/default.tt and record/body.tt to separate site/make_chart.tt; some tweaks to cron scripts
bugfixes - C::Roles::Chart::_get_chart_data() needs to look for 'defined' data-type 'points' in case of zeros, M::Roles::ScreenUpdate::do_auto_screen() was not updating request_status
screening functions (new & edit; not yet auto-screen at new request) display outcome summary of which lab-tests requested & which (if any) skipped; fixed many *.t issues caused by adding patient notes form to report page - made 'report' a multi-form page
added skipped_lab_tests & added_lab_tests arrays to M::Roles::ScreenUpdate::do_new_lab_tests to return outcome info to Controllers; replaced 3 object attributes with 2 LIMS::DB queries in M::Roles::ScreenUpdate::_have_required_sample_type_for_lab_test(); ErrorHandler uses L::Model::Email instead of L::Local::Mail - supplies required _app_cfg - email-admin function now works
patched C::Screen::edit() to use same screening function as used at initial screen; fixed a lot of failing tests due to new screening functions - report_status.t still failing
new tables sample_types, lab_section_sample_type & specimen_sample_type; added sample-type data to lab sections and specimens configuration functions; replaced arg to ErrorHandler::set_errorhandler_args with L::Local::Config->instance, as used in QueryLog
modified M::Roles::ScreenUpdate::_get_auto_screen_data() to handle a HoH for match criteria data to enable multiple criteria to be tested (eg clinical trial AND specimen type); new remodlb_alert.pl cron
used M::Roles::HistoryAction::do_request_history() function to update request_history instaed of dierct in M::Request::new_request(); hilis3 convert changes for merging flow_screen lab-tests with flow_cytometry section
