user registration number (GMC/HCPC) for reporters

* bugfix - 'lims_cfg' originally copied from Model class, should be cfg('settings') for Controllers * requires genomics central_labs setting changing to 'all_locations' * run.t broken - died with the YAML error: Can't use an undefined value as an ARRAY reference at [...]/LIMS/Local/IssueTracker.pm line 45

adapt central_labs for 'all_locations', app works but tests broken

* used Capture::Tiny in Local::DevelCycle - works OK with fastcgi process dumping fastcgi captured cycles to logfile, test harness & dev box fatal * user_agent string captured using HTTP::BrowserDetect

changed user message handling: * site.status.tt calls ajax/seek_new_messsages as jQuery on page load * site/status.tt calls new_messages.cgi every minute until 1 min before session timeout * set idle-timeout value in session user_profile, created at new login if no existing user profile * user session user_profile idle-timeout value in LIMS::_authen_config $authen_timeout sub * new $LIMS::Local::QueryLog::SKIP_LOG_QUERY to avoid logging specific queries (eg ajax/seek_new_messages) * updated new_messages.cgi with logging and formatted return msg to same as ajax/seek_new_messages

adapted allow >1 central laboratory (Genomics); new cfg flag to allow all requests to be reporter-authorised (UCLH); bugfix to user_permission.tt display; tweaked genomics_xml.t after changing consent taken to consent given

moved user messages user list from 1-stage to 2-stage select menu; reverted sysmex.pl to barcode lab-numbers; bugfix: report page highlighting 'unknown patient details' expecting hash key 'previous_cases', was changed to 'previous_requests' long ago

replaced iterator on users table with get_objects - iterator throws error if 1000 rows; put sort order on get_request_storage() query

improved new_user() method of validating input data and tt handling of errs - missing input caused misleading error messages, data validated in both preview & post actions; new status_complete.pl script

user manager performs login count before offering delete function to prevent FK violation; bugfix to expire_user_accounts.pl

new function to delete email contact address; updated mysql_backup.sh to new server config

new admin function to list all registered users; modified sysmex.pl init.d script so it loads at server start - needed path/to/perl

added direct link in registration details for use at 1st login; changed layout of tt_wrapper to remove extraneous white-space when rendering templates for text eg emails; revamped registration details message

patched L::Mail::_sendmail() to add 'content-type' header in lowercase otherwise ignored; M::User::register_login() truncates HTTP_USER_AGENT to mex 255 chars; gallium_data.pl sends .dat file as well as .xls

new functions to display user permissions and db status