package LIMS::Controller::Admin::Lab::Test;
use strict;
use base 'LIMS::Controller::Admin';
__PACKAGE__->authz->authz_runmodes( ':all' => 'do_admin' );
#-------------------------------------------------------------------------------
sub default : StartRunmode {
my $self = shift; $self->_debug_path($self->get_current_runmode);
my $errs = shift; # DEBUG $errs;
# first check we have at least 1 lab section defined:
unless ($self->have_lab_sections) {
$self->stash( error_msg => $self->messages('admin')->{no_sections} );
return $self->forward('missing_data');
}
# get list of lab_sections table data:
my $sections = $self->model('LabSection')->get_lab_sections();
unless ($sections) {
$self->stash( error_msg => $self->messages('admin')->{no_sections} );
}
my %args = ();
if ( my $lab_section_id = $self->query->param('lab_section_id') ) {
$args{lab_section_id} = $lab_section_id;
}
my $total = $self->model('LabTest')->get_lab_tests_count(\%args);
$args{sort_by} = $self->query->param('sort_by')
|| ['lab_section_id', 'field_label'];
if ( $total > $self->cfg('settings')->{entries_per_page} ) {
# invoke pager for template and add limit & offset params to \%args:
$self->pager({ query => \%args, total => $total });
}
# get list of all lab_tests (restricted by lab_section_id if supplied):
my $tests = $self->model('LabTest')->get_lab_tests(\%args);
{ # get list of specimen types:
my $data = $self->_get_specimen_types();
$self->tt_params( specimen_types => $data );
}
{ # get current lab_test specimen_types:
my $map = $self->_get_lab_test_specimen_types();
$self->tt_params( lab_test_specimen_types => $map );
}
{ # get current lab_section specimen_types:
my $map = $self->_get_lab_section_specimen_types();
$self->tt_params( lab_section_specimen_types => $map );
}
$self->tt_params(
tests => $tests,
sections => $sections,
);
# get js validation foo_onsubmit & foo_dfv_js vars into tt_params:
$self->js_validation_profile('lab_tests');
return $self->tt_process($errs);
}
#-------------------------------------------------------------------------------
sub edit : Runmode {
my $self = shift; $self->_debug_path($self->get_current_runmode);
my $errs = shift; # $self->stash( errs => $errs );
my $id = $self->param('id')
|| return $self->error('no id passed to '.$self->get_current_runmode); # $self->debug('id:'.$id);
{ # lab tests:
my $data = $self->model('LabTest')->get_lab_test($id);
$self->tt_params( data => $data );
}
{ # lab sections:
my $sections = $self->model('LabSection')->get_lab_sections(); # no need to sort
$self->tt_params( sections => $sections );
}
{ # get list of specimen types:
my $data = $self->_get_specimen_types();
$self->tt_params( specimen_types => $data );
}
{ # get lab_section specimen_types:
my $map = $self->_get_lab_section_specimen_types();
$self->tt_params( section_specimen_types => $map );
}
# get js validation foo_onsubmit & foo_dfv_js vars into tt_params:
$self->js_validation_profile('lab_tests');
return $self->tt_process($errs);
}
#-------------------------------------------------------------------------------
sub update : Runmode {
my $self = shift; $self->_debug_path($self->get_current_runmode);
my $id = $self->param('id');
# put id (if submitted) into params() as _record_id for validation:
if ( $id ) {
$self->query->param( _record_id => $id );
}
# if param 'id' passed, return error to edit():
my $error_rm = $id ? 'edit' : 'default';
my $dfv = $self->check_rm($error_rm, $self->validate('lab_tests') )
|| return $self->dfv_error_page;
my $data = $dfv->valid
|| return $self->forward('default'); # eg if empty param
# provide 'id' if supplied, so record updated, otherwise new one created:
if ($id) { $data->{id} = $id; }
my $rtn = $self->model('LabTest')->update_lab_tests($data);
return $rtn ?
$self->error($rtn) :
$self->redirect( $self->query->url . '/admin/lab_test' ); # safer to redirect after db edit
}
#-------------------------------------------------------------------------------
sub _get_lab_section_specimen_types { # get current lab_section specimen_types:
my $self = shift;
my $o = $self->model('Base')->get_objects('LabSectionSampleType');
my $map;
for (@$o) {
$map->{$_->lab_section_id}->{$_->sample_type_id}++;
}
return $map;
}
#-------------------------------------------------------------------------------
sub _get_lab_test_specimen_types { # get current lab_section specimen_types:
my $self = shift;
my $o = $self->model('Base')->get_objects('LabTestSampleType');
my $map;
for (@$o) {
$map->{$_->lab_test_id}->{$_->sample_type_id}++;
}
return $map;
}
#-------------------------------------------------------------------------------
sub _get_specimen_types { # get list of specimen types:
my $self = shift;
my $args = { sort_by => 'id' };
my $o = $self->model('Base')->get_objects('SampleType', $args);
return $o;
}
1;