#!/usr/bin/env perl
=begin -------------------------------------------------------------------------
diagnosis = 'awaiting final diagnosis, awaiting final review,'
=cut ---------------------------------------------------------------------------
use strict;
use warnings;
my $JUST_TESTING = 0; # email to ra.jones only
################################################################################
my @recipients = qw( douglas oconnor raj );
my $duration = 7; # how many calendar days since authorisation
################################################################################
use lib '/home/raj/perl5/lib/perl5';
use Data::Dumper;
use FindBin qw($Bin); # warn $Bin;
use lib $Bin . '/../../../lib';
use LIMS::Local::ScriptHelpers;
use DateTime::Format::MySQL;
# get tools from LIMS::Local::ScriptHelpers:
my $tools = LIMS::Local::ScriptHelpers->new();
$tools->test_only($JUST_TESTING);
my $sql_lib = $tools->sql_lib();
my $config = $tools->config();
my $dbix = $tools->dbix();
my $query = $sql_lib->retr('awaiting_final_diagnosis');
my $result = $dbix->query($query, $duration)->hashes;
exit unless @$result; # warn ref $result;
# auth_date to datetime:
$_->{auth_date} = DateTime::Format::MySQL->parse_date($_->{auth_date})
for @$result;
my $incomplete = _get_incomplete_requests($result);
# email subject line:
my $subject = sprintf 'Awaiting final diagnosis/review [%s]', scalar @$result;
# template:
my $tmpl = 'cron/awaiting_final_diagnosis.tt';
# data for tt:
my %h = (
requests => $result,
incomplete => $incomplete,
);
# message:
my $message = $tools->process_template($tmpl, \%h);
my %mail = (
content => 'html',
config => $config,
message => $message,
subject => $subject,
); # warn Dumper \%mail; exit;
$tools->send_mail(\%mail, \@recipients);
sub _get_incomplete_requests {
my $data = shift;
my @request_ids = map $_->{id}, @$data;
my $query = $sql_lib->retr('awaiting_final_diagnosis_incomplete_tests');
my $result = $dbix->query($query, @request_ids)->map;
return $result;
}