#!/usr/bin/perl
# http://www.perlfect.com/articles/sockets.shtml
BEGIN {
use FindBin qw($Bin); # warn 'BIN:'.$Bin;
# set lib paths for app:
use lib (
"$Bin/../lib",
'/home/raj/perl5/lib/perl5',
);
}
use strict;
use warnings;
use IO::All;
use IO::Socket;
use IO::Handle;
use LIMS::Local::ScriptHelpers;
use Data::Dumper;
use DateTime;
my $tools = LIMS::Local::ScriptHelpers->new();
my $dbix = $tools->dbix();
my $src = '/home/raj/scripts/socket_logs/socket.out.2';
my @file = io($src)->chomp->slurp; # warn Dumper @file;
my $tbl = 'request_haematology';
my @fields = qw(
pda wbc wbc_f rbc rbc_f hb hb_f hct hct_f mcv mcv_f mch mch_f mchc mchc_f
plt plt_f lymph_percent lymph_percent_f mixed_percent mixed_percent_f
neutr_percent neutr_percent_f lymph lymph_f mixed mixed_f neutr neutr_f
);
my %SQL = (
request_id => q!select id from requests where request_number = ? and year = ?!,
get_status => qq!select status from $tbl where request_id = ?!,
);
ROW:
for (@file) {
my $data = parse_data($_); # warn Dumper $data;
next ROW unless $data; # returns hashref or 0
# get request ID from request_number & year:
$dbix->query($SQL{request_id}, $data->{request_number}, $data->{year})
->into( my $request_id ); # warn $data->{request_id};
next ROW unless $request_id; # in case lab number entry in wrong format
# does request already have result:
$dbix->query($SQL{get_status}, $request_id)->into(my $status);
if ($status) { # exists - can only over-write if not already verified:
next ROW if $status eq 'verified'; # can't overwite here (delete in app)
$dbix->delete($tbl, { request_id => $request_id }); warn 'OVERWRITE';
}
# add request_id to $data & delete request_number & yr keys:
$data->{request_id} = $request_id;
delete $data->{$_} for qw(request_number year);
# insert new data:
$dbix->insert($tbl, $data);
}
=begin
our $data;
my $socket = IO::Socket::INET->new(
LocalHost => '163.160.171.164', # full IP address to accept external connections
LocalPort => 9001,
Proto => 'tcp',
Listen => 1,
ReuseAddr => 1
) or die "Could not create socket: $!\n";
=cut
=begin
Now the socket is ready to receive incoming connections. To wait for a connection,
we use the accept() method which will return a new socket through which we can
communicate with the calling program. Information exchange is achieved by
reading/writing on the new socket. The socket can be treated like a regular
filehandle.
=cut
=begin
while (1) { # permanent
# waiting for new client connection.
my $client_socket = $socket->accept();
# my $peer_address = $client_socket->peerhost();
# my $peer_port = $client_socket->peerport();
# print "Accepted New Client Connection From : $peer_address, $peer_port\n";
# my $data = <$client_socket>;
# we can also read from socket through recv() in IO::Socket::INET
$client_socket->read($data, 1024);
print $data;
}
=cut
=begin
# flush after every write
$| = 1;
open my $fh, '>', 'socket.out' or die $!;
$fh->autoflush(1);
my $tools = LIMS::Local::ScriptHelpers->new();
my $dbix = $tools->dbix();
while ( my $client_socket = $socket->accept ) {
# my $peer_address = $client_socket->peerhost();
# my $peer_port = $client_socket->peerport();
# print "Accepted new client connection from : $peer_address, $peer_port\n";
# read in 1024 chunks:
while ( $client_socket->read($data, 131) ) { # warn Dumper [ $now->datetime, $data ];
# print $fh DateTime->now->datetime . "\n$data\n";
print $fh $data . "\n";
my ($yr, $request_number) = $data =~ /D1U\d{16}(\d{2})\-(\d{5})/;
if ( $yr && $request_number ) {
warn Dumper [2000 + $yr, $request_number];
}
}
}
close $socket;
=cut
sub parse_data {
my $data = shift; # warn length $data;
my %h = (); # data hash to return
my ($labno, @params) = $data =~ /
D1U\d{16} # year,month,day + sample ID zero padding
([\d-]{8}) # req. no. - 8 char, right-aligned eg 000012_1, 0012_100, 12_10000, etc
(\w{6}) # PDA info
\d # RDW select || reserve
([\d*]{4})(\d) # wbc + flag
([\d*]{4})(\d) # rbc + flag
([\d*]{4})(\d) # hb + flag
([\d*]{4})(\d) # hct + flag
([\d*]{4})(\d) # mcv + flag
([\d*]{4})(\d) # mch + flag
([\d*]{4})(\d) # mchc + flag
([\d*]{4})(\d) # plt + flag
([\d*]{4})(\d) # lymph (%) + flag
([\d*]{4})(\d) # mixed (%) + flag
([\d*]{4})(\d) # neutr (%) + flag
([\d*]{4})(\d) # lymph (#) + flag
([\d*]{4})(\d) # mixed (#) + flag
([\d*]{4})(\d) # neutr (#) + flag
# .*{5} # rdw - don't need
# .*{5} # pdw - don't need
# .*{5} # mpv - don't need
# .*{5} # p-lrc - don't need
/x;
unless ($labno && @params) {
warn $data; # need to log with timestamp
return 0;
}
# split $labno on '-':
my ($yr, $request_number) = split '-', $labno;
return 0 unless $yr && $request_number; # warn Dumper [$yr, $request_number];
# create hash of data:
@h{@fields} = @params; # warn Dumper \%h;
# add request_number & year:
$h{request_number} = $request_number;
$h{year} = $yr + 2000; # warn Dumper \%h;
return \%h;
}