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bin
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updated spellchecker.pl to use hashref arg to Local::DB->dbix; HSCIC (ex CfH) now using csv + pdf in zip files
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10 years ago
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config
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RfC454 - generic worklists function performs row count before loading data * some genomics worklists >40,000 rows
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7 years ago
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docs
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tidy up (new files + .gitignore)
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8 years ago
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lib
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Filter section notes through TT '| html' to untaint
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6 years ago
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logs
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LIMS::Local::QueryLog - fix permissions issue with previous commit (9171b6a & bf60ec8); format queries for console & log file using SQL::Abstract::Tree
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7 years ago
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script
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bugfixes to enable all tests to pass - redirect.t has intermittent failure for unknown reason
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9 months ago
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sessions
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bugfix LL::ExcelHandler - no access to LIMS::error() method so replaced return with die; removed BEGIN block in sysmex.pl script - generates Carp version error in Deb7 perl version; changed directory permissions on sessions & src/data dirs to allow apache to read/write without requiring 777
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12 years ago
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setup
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bugfixes to enable all tests to pass - redirect.t has intermittent failure for unknown reason
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9 months ago
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src
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bugfixes to enable all tests to pass - redirect.t has intermittent failure for unknown reason
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9 months ago
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static
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NGIS - update WGS referral form to v1.12
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6 years ago
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t
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bugfixes to enable all tests to pass - redirect.t has intermittent failure for unknown reason
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9 months ago
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templates
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Update worklist template design
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6 years ago
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.gitignore
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4kB
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new GeNEQ data extraction script; add command-line option for request id input
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6 years ago
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Makefile.PL
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6kB
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Local::QueryLog * modify substitute_placeholders method to handle bind params containing parens-within-parens * modify Local::DBIxSimple, RDBO & RDBO::Manager to join bind params on null-byte instead of comma to avoid breaking split on bind params which already contain commas * protect placeholder substitution from vars containing question-mark * protect SQL::Abstract::Tree query formatting from control characters (eg parens, question-marks) * append undef's to end of @bind for any trailing table cols with default values (eg timestamp cols) * substitute NULL for undef bind params * simplify _warn_handler() logic, returns early if not required
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7 years ago
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module_build.pl
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6kB
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Local::QueryLog * modify substitute_placeholders method to handle bind params containing parens-within-parens * modify Local::DBIxSimple, RDBO & RDBO::Manager to join bind params on null-byte instead of comma to avoid breaking split on bind params which already contain commas * protect placeholder substitution from vars containing question-mark * protect SQL::Abstract::Tree query formatting from control characters (eg parens, question-marks) * append undef's to end of @bind for any trailing table cols with default values (eg timestamp cols) * substitute NULL for undef bind params * simplify _warn_handler() logic, returns early if not required
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7 years ago
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